Full text data of C5orf51
C5orf51
[Confidence: low (only semi-automatic identification from reviews)]
UPF0600 protein C5orf51
Note: presumably soluble (membrane word is not in UniProt keywords or features)
UPF0600 protein C5orf51
Note: presumably soluble (membrane word is not in UniProt keywords or features)
UniProt
A6NDU8
ID CE051_HUMAN Reviewed; 294 AA.
AC A6NDU8; A2RRM9;
DT 10-JUN-2008, integrated into UniProtKB/Swiss-Prot.
read moreDT 24-JUL-2007, sequence version 1.
DT 22-JAN-2014, entry version 50.
DE RecName: Full=UPF0600 protein C5orf51;
GN Name=C5orf51;
OS Homo sapiens (Human).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
OC Catarrhini; Hominidae; Homo.
OX NCBI_TaxID=9606;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=15372022; DOI=10.1038/nature02919;
RA Schmutz J., Martin J., Terry A., Couronne O., Grimwood J., Lowry S.,
RA Gordon L.A., Scott D., Xie G., Huang W., Hellsten U., Tran-Gyamfi M.,
RA She X., Prabhakar S., Aerts A., Altherr M., Bajorek E., Black S.,
RA Branscomb E., Caoile C., Challacombe J.F., Chan Y.M., Denys M.,
RA Detter J.C., Escobar J., Flowers D., Fotopulos D., Glavina T.,
RA Gomez M., Gonzales E., Goodstein D., Grigoriev I., Groza M.,
RA Hammon N., Hawkins T., Haydu L., Israni S., Jett J., Kadner K.,
RA Kimball H., Kobayashi A., Lopez F., Lou Y., Martinez D., Medina C.,
RA Morgan J., Nandkeshwar R., Noonan J.P., Pitluck S., Pollard M.,
RA Predki P., Priest J., Ramirez L., Retterer J., Rodriguez A.,
RA Rogers S., Salamov A., Salazar A., Thayer N., Tice H., Tsai M.,
RA Ustaszewska A., Vo N., Wheeler J., Wu K., Yang J., Dickson M.,
RA Cheng J.-F., Eichler E.E., Olsen A., Pennacchio L.A., Rokhsar D.S.,
RA Richardson P., Lucas S.M., Myers R.M., Rubin E.M.;
RT "The DNA sequence and comparative analysis of human chromosome 5.";
RL Nature 431:268-274(2004).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L.,
RA Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R.,
RA Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V.,
RA Hannenhalli S., Turner R., Yooseph S., Lu F., Nusskern D.R.,
RA Shue B.C., Zheng X.H., Zhong F., Delcher A.L., Huson D.H.,
RA Kravitz S.A., Mouchard L., Reinert K., Remington K.A., Clark A.G.,
RA Waterman M.S., Eichler E.E., Adams M.D., Hunkapiller M.W., Myers E.W.,
RA Venter J.C.;
RL Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases.
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA
RT project: the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
RN [4]
RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RX PubMed=21269460; DOI=10.1186/1752-0509-5-17;
RA Burkard T.R., Planyavsky M., Kaupe I., Breitwieser F.P.,
RA Buerckstuemmer T., Bennett K.L., Superti-Furga G., Colinge J.;
RT "Initial characterization of the human central proteome.";
RL BMC Syst. Biol. 5:17-17(2011).
RN [5]
RP ACETYLATION [LARGE SCALE ANALYSIS] AT ALA-2, MASS SPECTROMETRY, AND
RP CLEAVAGE OF INITIATOR METHIONINE.
RX PubMed=22814378; DOI=10.1073/pnas.1210303109;
RA Van Damme P., Lasa M., Polevoda B., Gazquez C., Elosegui-Artola A.,
RA Kim D.S., De Juan-Pardo E., Demeyer K., Hole K., Larrea E.,
RA Timmerman E., Prieto J., Arnesen T., Sherman F., Gevaert K.,
RA Aldabe R.;
RT "N-terminal acetylome analyses and functional insights of the N-
RT terminal acetyltransferase NatB.";
RL Proc. Natl. Acad. Sci. U.S.A. 109:12449-12454(2012).
CC -!- SIMILARITY: Belongs to the UPF0600 family.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAI31722.1; Type=Miscellaneous discrepancy; Note=Unlikely isoform. Aberrant splice sites;
CC -----------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution-NoDerivs License
CC -----------------------------------------------------------------------
DR EMBL; AC034222; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CH471119; EAW56017.1; -; Genomic_DNA.
DR EMBL; BC131721; AAI31722.1; ALT_SEQ; mRNA.
DR RefSeq; NP_787117.3; NM_175921.4.
DR RefSeq; XP_005248347.1; XM_005248290.1.
DR UniGene; Hs.29899; -.
DR ProteinModelPortal; A6NDU8; -.
DR PhosphoSite; A6NDU8; -.
DR PaxDb; A6NDU8; -.
DR PeptideAtlas; A2RRM9; -.
DR PRIDE; A6NDU8; -.
DR Ensembl; ENST00000381647; ENSP00000371061; ENSG00000205765.
DR GeneID; 285636; -.
DR KEGG; hsa:285636; -.
DR UCSC; uc003jmo.3; human.
DR CTD; 285636; -.
DR GeneCards; GC05P041910; -.
DR HGNC; HGNC:27750; C5orf51.
DR neXtProt; NX_A6NDU8; -.
DR PharmGKB; PA162380371; -.
DR eggNOG; NOG29617; -.
DR HOGENOM; HOG000111520; -.
DR HOVERGEN; HBG107642; -.
DR InParanoid; A6NDU8; -.
DR OMA; NFFQHHT; -.
DR OrthoDB; EOG7NCV43; -.
DR PhylomeDB; A6NDU8; -.
DR GenomeRNAi; 285636; -.
DR NextBio; 95671; -.
DR Bgee; A6NDU8; -.
DR CleanEx; HS_C5orf51; -.
DR Genevestigator; A6NDU8; -.
PE 1: Evidence at protein level;
KW Acetylation; Complete proteome; Polymorphism; Reference proteome.
FT INIT_MET 1 1 Removed.
FT CHAIN 2 294 UPF0600 protein C5orf51.
FT /FTId=PRO_0000341214.
FT MOD_RES 2 2 N-acetylalanine.
FT VARIANT 20 20 Q -> H (in dbSNP:rs12520325).
FT /FTId=VAR_044032.
SQ SEQUENCE 294 AA; 33620 MW; 31BE22D36F768CC4 CRC64;
MAAAVSSVVR RVEELGDLAQ AHIQQLSEAA GEDDHFLIRA SAALEKLKLL CGEEKECSNP
SNLLELYTQA ILDMTYFEEN KLVDEDFPED SSSQKVKELI SFLSEPEILV KENNMHPKHC
NLLGDELLEC LSWRRGALLY MYCHSLTKRR EWLLRKSSLL KKYLLDGISY LLQMLNYRCP
IQLNEGVSFQ DLDTAKLLSA GIFSDIHLLA MMYSGEMCYW GSKYCADQQP ENHEVDTSVS
GAGCTTYKEP LDFREVGEKI LKKYVSVCEG PLKEQEWNTT NAKQILNFFH HRCN
//
ID CE051_HUMAN Reviewed; 294 AA.
AC A6NDU8; A2RRM9;
DT 10-JUN-2008, integrated into UniProtKB/Swiss-Prot.
read moreDT 24-JUL-2007, sequence version 1.
DT 22-JAN-2014, entry version 50.
DE RecName: Full=UPF0600 protein C5orf51;
GN Name=C5orf51;
OS Homo sapiens (Human).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
OC Catarrhini; Hominidae; Homo.
OX NCBI_TaxID=9606;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=15372022; DOI=10.1038/nature02919;
RA Schmutz J., Martin J., Terry A., Couronne O., Grimwood J., Lowry S.,
RA Gordon L.A., Scott D., Xie G., Huang W., Hellsten U., Tran-Gyamfi M.,
RA She X., Prabhakar S., Aerts A., Altherr M., Bajorek E., Black S.,
RA Branscomb E., Caoile C., Challacombe J.F., Chan Y.M., Denys M.,
RA Detter J.C., Escobar J., Flowers D., Fotopulos D., Glavina T.,
RA Gomez M., Gonzales E., Goodstein D., Grigoriev I., Groza M.,
RA Hammon N., Hawkins T., Haydu L., Israni S., Jett J., Kadner K.,
RA Kimball H., Kobayashi A., Lopez F., Lou Y., Martinez D., Medina C.,
RA Morgan J., Nandkeshwar R., Noonan J.P., Pitluck S., Pollard M.,
RA Predki P., Priest J., Ramirez L., Retterer J., Rodriguez A.,
RA Rogers S., Salamov A., Salazar A., Thayer N., Tice H., Tsai M.,
RA Ustaszewska A., Vo N., Wheeler J., Wu K., Yang J., Dickson M.,
RA Cheng J.-F., Eichler E.E., Olsen A., Pennacchio L.A., Rokhsar D.S.,
RA Richardson P., Lucas S.M., Myers R.M., Rubin E.M.;
RT "The DNA sequence and comparative analysis of human chromosome 5.";
RL Nature 431:268-274(2004).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L.,
RA Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R.,
RA Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V.,
RA Hannenhalli S., Turner R., Yooseph S., Lu F., Nusskern D.R.,
RA Shue B.C., Zheng X.H., Zhong F., Delcher A.L., Huson D.H.,
RA Kravitz S.A., Mouchard L., Reinert K., Remington K.A., Clark A.G.,
RA Waterman M.S., Eichler E.E., Adams M.D., Hunkapiller M.W., Myers E.W.,
RA Venter J.C.;
RL Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases.
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA
RT project: the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
RN [4]
RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RX PubMed=21269460; DOI=10.1186/1752-0509-5-17;
RA Burkard T.R., Planyavsky M., Kaupe I., Breitwieser F.P.,
RA Buerckstuemmer T., Bennett K.L., Superti-Furga G., Colinge J.;
RT "Initial characterization of the human central proteome.";
RL BMC Syst. Biol. 5:17-17(2011).
RN [5]
RP ACETYLATION [LARGE SCALE ANALYSIS] AT ALA-2, MASS SPECTROMETRY, AND
RP CLEAVAGE OF INITIATOR METHIONINE.
RX PubMed=22814378; DOI=10.1073/pnas.1210303109;
RA Van Damme P., Lasa M., Polevoda B., Gazquez C., Elosegui-Artola A.,
RA Kim D.S., De Juan-Pardo E., Demeyer K., Hole K., Larrea E.,
RA Timmerman E., Prieto J., Arnesen T., Sherman F., Gevaert K.,
RA Aldabe R.;
RT "N-terminal acetylome analyses and functional insights of the N-
RT terminal acetyltransferase NatB.";
RL Proc. Natl. Acad. Sci. U.S.A. 109:12449-12454(2012).
CC -!- SIMILARITY: Belongs to the UPF0600 family.
CC -!- SEQUENCE CAUTION:
CC Sequence=AAI31722.1; Type=Miscellaneous discrepancy; Note=Unlikely isoform. Aberrant splice sites;
CC -----------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution-NoDerivs License
CC -----------------------------------------------------------------------
DR EMBL; AC034222; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CH471119; EAW56017.1; -; Genomic_DNA.
DR EMBL; BC131721; AAI31722.1; ALT_SEQ; mRNA.
DR RefSeq; NP_787117.3; NM_175921.4.
DR RefSeq; XP_005248347.1; XM_005248290.1.
DR UniGene; Hs.29899; -.
DR ProteinModelPortal; A6NDU8; -.
DR PhosphoSite; A6NDU8; -.
DR PaxDb; A6NDU8; -.
DR PeptideAtlas; A2RRM9; -.
DR PRIDE; A6NDU8; -.
DR Ensembl; ENST00000381647; ENSP00000371061; ENSG00000205765.
DR GeneID; 285636; -.
DR KEGG; hsa:285636; -.
DR UCSC; uc003jmo.3; human.
DR CTD; 285636; -.
DR GeneCards; GC05P041910; -.
DR HGNC; HGNC:27750; C5orf51.
DR neXtProt; NX_A6NDU8; -.
DR PharmGKB; PA162380371; -.
DR eggNOG; NOG29617; -.
DR HOGENOM; HOG000111520; -.
DR HOVERGEN; HBG107642; -.
DR InParanoid; A6NDU8; -.
DR OMA; NFFQHHT; -.
DR OrthoDB; EOG7NCV43; -.
DR PhylomeDB; A6NDU8; -.
DR GenomeRNAi; 285636; -.
DR NextBio; 95671; -.
DR Bgee; A6NDU8; -.
DR CleanEx; HS_C5orf51; -.
DR Genevestigator; A6NDU8; -.
PE 1: Evidence at protein level;
KW Acetylation; Complete proteome; Polymorphism; Reference proteome.
FT INIT_MET 1 1 Removed.
FT CHAIN 2 294 UPF0600 protein C5orf51.
FT /FTId=PRO_0000341214.
FT MOD_RES 2 2 N-acetylalanine.
FT VARIANT 20 20 Q -> H (in dbSNP:rs12520325).
FT /FTId=VAR_044032.
SQ SEQUENCE 294 AA; 33620 MW; 31BE22D36F768CC4 CRC64;
MAAAVSSVVR RVEELGDLAQ AHIQQLSEAA GEDDHFLIRA SAALEKLKLL CGEEKECSNP
SNLLELYTQA ILDMTYFEEN KLVDEDFPED SSSQKVKELI SFLSEPEILV KENNMHPKHC
NLLGDELLEC LSWRRGALLY MYCHSLTKRR EWLLRKSSLL KKYLLDGISY LLQMLNYRCP
IQLNEGVSFQ DLDTAKLLSA GIFSDIHLLA MMYSGEMCYW GSKYCADQQP ENHEVDTSVS
GAGCTTYKEP LDFREVGEKI LKKYVSVCEG PLKEQEWNTT NAKQILNFFH HRCN
//