Full text data of C16orf80
C16orf80
[Confidence: low (only semi-automatic identification from reviews)]
UPF0468 protein C16orf80 (Transcription factor IIB)
Note: presumably soluble (membrane word is not in UniProt keywords or features)
UPF0468 protein C16orf80 (Transcription factor IIB)
Note: presumably soluble (membrane word is not in UniProt keywords or features)
UniProt
Q9Y6A4
ID CP080_HUMAN Reviewed; 193 AA.
AC Q9Y6A4;
DT 24-JUL-2007, integrated into UniProtKB/Swiss-Prot.
read moreDT 01-NOV-1999, sequence version 1.
DT 22-JAN-2014, entry version 83.
DE RecName: Full=UPF0468 protein C16orf80;
DE AltName: Full=Transcription factor IIB;
GN Name=C16orf80;
OS Homo sapiens (Human).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
OC Catarrhini; Hominidae; Homo.
OX NCBI_TaxID=9606;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Zhang M., Yu L., Li N.G., Zhou Y., Zheng L.H., Zhao S.Y.;
RT "Cloning of a novel human cDNA homologous to murine evolutionary
RT conserved transcript.";
RL Submitted (AUG-1998) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Pituitary;
RA Peng Y., Song H., Dai M., Huang Q., Mao Y., Zhang Q., Mao M., Fu G.,
RA Luo M., Chen J., Hu R.;
RT "Human transcription factor IIB mRNA, complete cds.";
RL Submitted (SEP-1998) to the EMBL/GenBank/DDBJ databases.
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Muscle;
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA
RT project: the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
RN [4]
RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RX PubMed=21269460; DOI=10.1186/1752-0509-5-17;
RA Burkard T.R., Planyavsky M., Kaupe I., Breitwieser F.P.,
RA Buerckstuemmer T., Bennett K.L., Superti-Furga G., Colinge J.;
RT "Initial characterization of the human central proteome.";
RL BMC Syst. Biol. 5:17-17(2011).
CC -!- SIMILARITY: Belongs to the UPF0468 family.
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DR EMBL; AF087845; AAP97158.1; -; mRNA.
DR EMBL; AF093680; AAD40382.1; -; mRNA.
DR EMBL; BC005152; AAH05152.1; -; mRNA.
DR RefSeq; NP_037374.1; NM_013242.2.
DR UniGene; Hs.532755; -.
DR ProteinModelPortal; Q9Y6A4; -.
DR IntAct; Q9Y6A4; 2.
DR MINT; MINT-1683561; -.
DR STRING; 9606.ENSP00000262498; -.
DR PhosphoSite; Q9Y6A4; -.
DR DMDM; 74753521; -.
DR PaxDb; Q9Y6A4; -.
DR PRIDE; Q9Y6A4; -.
DR DNASU; 29105; -.
DR Ensembl; ENST00000262498; ENSP00000262498; ENSG00000070761.
DR GeneID; 29105; -.
DR KEGG; hsa:29105; -.
DR UCSC; uc002enb.1; human.
DR CTD; 29105; -.
DR GeneCards; GC16M058147; -.
DR HGNC; HGNC:29523; C16orf80.
DR HPA; HPA018195; -.
DR neXtProt; NX_Q9Y6A4; -.
DR PharmGKB; PA162378384; -.
DR eggNOG; NOG329885; -.
DR HOGENOM; HOG000257095; -.
DR HOVERGEN; HBG102938; -.
DR InParanoid; Q9Y6A4; -.
DR OMA; FTFEVQI; -.
DR OrthoDB; EOG7DNNX8; -.
DR PhylomeDB; Q9Y6A4; -.
DR ChiTaRS; C16orf80; human.
DR GenomeRNAi; 29105; -.
DR NextBio; 52157; -.
DR ArrayExpress; Q9Y6A4; -.
DR Bgee; Q9Y6A4; -.
DR CleanEx; HS_C16orf80; -.
DR Genevestigator; Q9Y6A4; -.
DR GO; GO:0005929; C:cilium; IEA:Ensembl.
DR GO; GO:0007275; P:multicellular organismal development; TAS:ProtInc.
DR InterPro; IPR007714; DUF667.
DR PANTHER; PTHR12458; PTHR12458; 1.
DR Pfam; PF05018; DUF667; 1.
PE 1: Evidence at protein level;
KW Complete proteome; Reference proteome.
FT CHAIN 1 193 UPF0468 protein C16orf80.
FT /FTId=PRO_0000296398.
SQ SEQUENCE 193 AA; 22774 MW; 82ECDB0D2515BF77 CRC64;
MFKNTFQSGF LSILYSIGSK PLQIWDKKVR NGHIKRITDN DIQSLVLEIE GTNVSTTYIT
CPADPKKTLG IKLPFLVMII KNLKKYFTFE VQVLDDKNVR RRFRASNYQS TTRVKPFICT
MPMRLDDGWN QIQFNLLDFT RRAYGTNYIE TLRVQIHANC RIRRVYFSDR LYSEDELPAE
FKLYLPVQNK AKQ
//
ID CP080_HUMAN Reviewed; 193 AA.
AC Q9Y6A4;
DT 24-JUL-2007, integrated into UniProtKB/Swiss-Prot.
read moreDT 01-NOV-1999, sequence version 1.
DT 22-JAN-2014, entry version 83.
DE RecName: Full=UPF0468 protein C16orf80;
DE AltName: Full=Transcription factor IIB;
GN Name=C16orf80;
OS Homo sapiens (Human).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
OC Catarrhini; Hominidae; Homo.
OX NCBI_TaxID=9606;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RA Zhang M., Yu L., Li N.G., Zhou Y., Zheng L.H., Zhao S.Y.;
RT "Cloning of a novel human cDNA homologous to murine evolutionary
RT conserved transcript.";
RL Submitted (AUG-1998) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Pituitary;
RA Peng Y., Song H., Dai M., Huang Q., Mao Y., Zhang Q., Mao M., Fu G.,
RA Luo M., Chen J., Hu R.;
RT "Human transcription factor IIB mRNA, complete cds.";
RL Submitted (SEP-1998) to the EMBL/GenBank/DDBJ databases.
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Muscle;
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA
RT project: the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
RN [4]
RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RX PubMed=21269460; DOI=10.1186/1752-0509-5-17;
RA Burkard T.R., Planyavsky M., Kaupe I., Breitwieser F.P.,
RA Buerckstuemmer T., Bennett K.L., Superti-Furga G., Colinge J.;
RT "Initial characterization of the human central proteome.";
RL BMC Syst. Biol. 5:17-17(2011).
CC -!- SIMILARITY: Belongs to the UPF0468 family.
CC -----------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution-NoDerivs License
CC -----------------------------------------------------------------------
DR EMBL; AF087845; AAP97158.1; -; mRNA.
DR EMBL; AF093680; AAD40382.1; -; mRNA.
DR EMBL; BC005152; AAH05152.1; -; mRNA.
DR RefSeq; NP_037374.1; NM_013242.2.
DR UniGene; Hs.532755; -.
DR ProteinModelPortal; Q9Y6A4; -.
DR IntAct; Q9Y6A4; 2.
DR MINT; MINT-1683561; -.
DR STRING; 9606.ENSP00000262498; -.
DR PhosphoSite; Q9Y6A4; -.
DR DMDM; 74753521; -.
DR PaxDb; Q9Y6A4; -.
DR PRIDE; Q9Y6A4; -.
DR DNASU; 29105; -.
DR Ensembl; ENST00000262498; ENSP00000262498; ENSG00000070761.
DR GeneID; 29105; -.
DR KEGG; hsa:29105; -.
DR UCSC; uc002enb.1; human.
DR CTD; 29105; -.
DR GeneCards; GC16M058147; -.
DR HGNC; HGNC:29523; C16orf80.
DR HPA; HPA018195; -.
DR neXtProt; NX_Q9Y6A4; -.
DR PharmGKB; PA162378384; -.
DR eggNOG; NOG329885; -.
DR HOGENOM; HOG000257095; -.
DR HOVERGEN; HBG102938; -.
DR InParanoid; Q9Y6A4; -.
DR OMA; FTFEVQI; -.
DR OrthoDB; EOG7DNNX8; -.
DR PhylomeDB; Q9Y6A4; -.
DR ChiTaRS; C16orf80; human.
DR GenomeRNAi; 29105; -.
DR NextBio; 52157; -.
DR ArrayExpress; Q9Y6A4; -.
DR Bgee; Q9Y6A4; -.
DR CleanEx; HS_C16orf80; -.
DR Genevestigator; Q9Y6A4; -.
DR GO; GO:0005929; C:cilium; IEA:Ensembl.
DR GO; GO:0007275; P:multicellular organismal development; TAS:ProtInc.
DR InterPro; IPR007714; DUF667.
DR PANTHER; PTHR12458; PTHR12458; 1.
DR Pfam; PF05018; DUF667; 1.
PE 1: Evidence at protein level;
KW Complete proteome; Reference proteome.
FT CHAIN 1 193 UPF0468 protein C16orf80.
FT /FTId=PRO_0000296398.
SQ SEQUENCE 193 AA; 22774 MW; 82ECDB0D2515BF77 CRC64;
MFKNTFQSGF LSILYSIGSK PLQIWDKKVR NGHIKRITDN DIQSLVLEIE GTNVSTTYIT
CPADPKKTLG IKLPFLVMII KNLKKYFTFE VQVLDDKNVR RRFRASNYQS TTRVKPFICT
MPMRLDDGWN QIQFNLLDFT RRAYGTNYIE TLRVQIHANC RIRRVYFSDR LYSEDELPAE
FKLYLPVQNK AKQ
//