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Full text data of CYSTM1

CYSTM1 (C5orf32) [Confidence: low (only semi-automatic identification from reviews)]
Cysteine-rich and transmembrane domain-containing protein 1

UniProt Q9H1C7
ID CYTM1_HUMAN Reviewed; 97 AA.
AC Q9H1C7; Q8TBA5;
DT 24-JUL-2007, integrated into UniProtKB/Swiss-Prot.
read moreDT 01-MAR-2001, sequence version 1.
DT 22-JAN-2014, entry version 74.
DE RecName: Full=Cysteine-rich and transmembrane domain-containing protein 1;
GN Name=CYSTM1; Synonyms=C5orf32; ORFNames=ORF1-FL49;
OS Homo sapiens (Human).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
OC Catarrhini; Hominidae; Homo.
OX NCBI_TaxID=9606;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Skeletal muscle;
RA Ievolella C., Zara I., Millino C., Faulkner G., Lanfranchi G.;
RT "Full length sequencing of some human and murine muscular transcripts
RT (Telethon Italy project B41).";
RL Submitted (AUG-1999) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA], AND VARIANT SER-90.
RC TISSUE=Brain, and Skin;
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA
RT project: the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
RN [3]
RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RX PubMed=21269460; DOI=10.1186/1752-0509-5-17;
RA Burkard T.R., Planyavsky M., Kaupe I., Breitwieser F.P.,
RA Buerckstuemmer T., Bennett K.L., Superti-Furga G., Colinge J.;
RT "Initial characterization of the human central proteome.";
RL BMC Syst. Biol. 5:17-17(2011).
CC -!- SUBCELLULAR LOCATION: Membrane; Single-pass membrane protein
CC (Potential).
CC -!- SIMILARITY: Belongs to the CYSTM1 family.
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DR EMBL; AJ245877; CAC21572.1; -; mRNA.
DR EMBL; BC013643; AAH13643.1; -; mRNA.
DR EMBL; BC023982; AAH23982.1; -; mRNA.
DR RefSeq; NP_115788.1; NM_032412.3.
DR UniGene; Hs.529798; -.
DR ProteinModelPortal; Q9H1C7; -.
DR MINT; MINT-5005612; -.
DR PhosphoSite; Q9H1C7; -.
DR PaxDb; Q9H1C7; -.
DR PRIDE; Q9H1C7; -.
DR DNASU; 84418; -.
DR Ensembl; ENST00000261811; ENSP00000261811; ENSG00000120306.
DR GeneID; 84418; -.
DR KEGG; hsa:84418; -.
DR UCSC; uc003lfd.3; human.
DR CTD; 84418; -.
DR GeneCards; GC05P139555; -.
DR HGNC; HGNC:30239; CYSTM1.
DR HPA; HPA050930; -.
DR neXtProt; NX_Q9H1C7; -.
DR PharmGKB; PA162380028; -.
DR eggNOG; NOG84012; -.
DR HOGENOM; HOG000111512; -.
DR InParanoid; Q9H1C7; -.
DR OMA; SCLTACW; -.
DR OrthoDB; EOG7673FF; -.
DR GenomeRNAi; 84418; -.
DR NextBio; 74156; -.
DR PRO; PR:Q9H1C7; -.
DR Bgee; Q9H1C7; -.
DR CleanEx; HS_C5orf32; -.
DR Genevestigator; Q9H1C7; -.
DR GO; GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
DR InterPro; IPR028144; CYSTM_dom.
DR Pfam; PF12734; CYSTM; 1.
PE 1: Evidence at protein level;
KW Complete proteome; Membrane; Polymorphism; Reference proteome;
KW Transmembrane; Transmembrane helix.
FT CHAIN 1 97 Cysteine-rich and transmembrane domain-
FT containing protein 1.
FT /FTId=PRO_0000296358.
FT TRANSMEM 74 91 Helical; (Potential).
FT COMPBIAS 6 59 Pro-rich.
FT COMPBIAS 88 91 Poly-Cys.
FT VARIANT 90 90 C -> S (in dbSNP:rs17852164).
FT /FTId=VAR_034629.
SQ SEQUENCE 97 AA; 10631 MW; 93A64A2482B41F5B CRC64;
MNQENPPPYP GPGPTAPYPP YPPQPMGPGP MGGPYPPPQG YPYQGYPQYG WQGGPQEPPK
TTVYVVEDQR RDELGPSTCL TACWTALCCC CLWDMLT
//

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Full text data of CYSTM1