Full text data of RCCD1
RCCD1
[Confidence: low (only semi-automatic identification from reviews)]
RCC1 domain-containing protein 1
Note: presumably soluble (membrane word is not in UniProt keywords or features)
RCC1 domain-containing protein 1
Note: presumably soluble (membrane word is not in UniProt keywords or features)
UniProt
A6NED2
ID RCCD1_HUMAN Reviewed; 376 AA.
AC A6NED2; B2RTP9; Q29RX6;
DT 10-JUN-2008, integrated into UniProtKB/Swiss-Prot.
read moreDT 24-JUL-2007, sequence version 1.
DT 22-JAN-2014, entry version 56.
DE RecName: Full=RCC1 domain-containing protein 1;
GN Name=RCCD1;
OS Homo sapiens (Human).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
OC Catarrhini; Hominidae; Homo.
OX NCBI_TaxID=9606;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=16572171; DOI=10.1038/nature04601;
RA Zody M.C., Garber M., Sharpe T., Young S.K., Rowen L., O'Neill K.,
RA Whittaker C.A., Kamal M., Chang J.L., Cuomo C.A., Dewar K.,
RA FitzGerald M.G., Kodira C.D., Madan A., Qin S., Yang X., Abbasi N.,
RA Abouelleil A., Arachchi H.M., Baradarani L., Birditt B., Bloom S.,
RA Bloom T., Borowsky M.L., Burke J., Butler J., Cook A., DeArellano K.,
RA DeCaprio D., Dorris L. III, Dors M., Eichler E.E., Engels R.,
RA Fahey J., Fleetwood P., Friedman C., Gearin G., Hall J.L., Hensley G.,
RA Johnson E., Jones C., Kamat A., Kaur A., Locke D.P., Madan A.,
RA Munson G., Jaffe D.B., Lui A., Macdonald P., Mauceli E., Naylor J.W.,
RA Nesbitt R., Nicol R., O'Leary S.B., Ratcliffe A., Rounsley S., She X.,
RA Sneddon K.M.B., Stewart S., Sougnez C., Stone S.M., Topham K.,
RA Vincent D., Wang S., Zimmer A.R., Birren B.W., Hood L., Lander E.S.,
RA Nusbaum C.;
RT "Analysis of the DNA sequence and duplication history of human
RT chromosome 15.";
RL Nature 440:671-675(2006).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L.,
RA Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R.,
RA Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V.,
RA Hannenhalli S., Turner R., Yooseph S., Lu F., Nusskern D.R.,
RA Shue B.C., Zheng X.H., Zhong F., Delcher A.L., Huson D.H.,
RA Kravitz S.A., Mouchard L., Reinert K., Remington K.A., Clark A.G.,
RA Waterman M.S., Eichler E.E., Adams M.D., Hunkapiller M.W., Myers E.W.,
RA Venter J.C.;
RL Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases.
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Brain;
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA
RT project: the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
RN [4]
RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RX PubMed=21269460; DOI=10.1186/1752-0509-5-17;
RA Burkard T.R., Planyavsky M., Kaupe I., Breitwieser F.P.,
RA Buerckstuemmer T., Bennett K.L., Superti-Furga G., Colinge J.;
RT "Initial characterization of the human central proteome.";
RL BMC Syst. Biol. 5:17-17(2011).
CC -!- SIMILARITY: Contains 4 RCC1 repeats.
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DR EMBL; AC068831; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CH471101; EAX02130.1; -; Genomic_DNA.
DR EMBL; BC113826; AAI13827.1; -; mRNA.
DR EMBL; BC140708; AAI40709.1; -; mRNA.
DR EMBL; BC140709; AAI40710.1; -; mRNA.
DR RefSeq; NP_001017919.1; NM_001017919.1.
DR RefSeq; NP_291022.2; NM_033544.2.
DR UniGene; Hs.655895; -.
DR ProteinModelPortal; A6NED2; -.
DR SMR; A6NED2; 119-370.
DR PhosphoSite; A6NED2; -.
DR PaxDb; A6NED2; -.
DR PRIDE; A6NED2; -.
DR Ensembl; ENST00000394258; ENSP00000377801; ENSG00000166965.
DR Ensembl; ENST00000556618; ENSP00000451963; ENSG00000166965.
DR GeneID; 91433; -.
DR KEGG; hsa:91433; -.
DR UCSC; uc002bqj.3; human.
DR CTD; 91433; -.
DR GeneCards; GC15P091498; -.
DR HGNC; HGNC:30457; RCCD1.
DR HPA; HPA039683; -.
DR HPA; HPA040776; -.
DR neXtProt; NX_A6NED2; -.
DR PharmGKB; PA142671092; -.
DR eggNOG; NOG305770; -.
DR HOGENOM; HOG000154085; -.
DR HOVERGEN; HBG061852; -.
DR InParanoid; A6NED2; -.
DR OMA; LPCARAY; -.
DR OrthoDB; EOG7MSMP8; -.
DR PhylomeDB; A6NED2; -.
DR GenomeRNAi; 91433; -.
DR NextBio; 77244; -.
DR PRO; PR:A6NED2; -.
DR ArrayExpress; A6NED2; -.
DR Bgee; A6NED2; -.
DR CleanEx; HS_RCCD1; -.
DR Genevestigator; A6NED2; -.
DR GO; GO:0005737; C:cytoplasm; IDA:HPA.
DR GO; GO:0005886; C:plasma membrane; IDA:HPA.
DR Gene3D; 2.130.10.30; -; 2.
DR InterPro; IPR009091; RCC1/BLIP-II.
DR InterPro; IPR000408; Reg_chr_condens.
DR Pfam; PF00415; RCC1; 2.
DR PRINTS; PR00633; RCCNDNSATION.
DR SUPFAM; SSF50985; SSF50985; 3.
DR PROSITE; PS00625; RCC1_1; FALSE_NEG.
DR PROSITE; PS00626; RCC1_2; 2.
DR PROSITE; PS50012; RCC1_3; 3.
PE 1: Evidence at protein level;
KW Complete proteome; Polymorphism; Reference proteome; Repeat.
FT CHAIN 1 376 RCC1 domain-containing protein 1.
FT /FTId=PRO_0000337973.
FT REPEAT 6 56 RCC1 1.
FT REPEAT 176 227 RCC1 2.
FT REPEAT 229 317 RCC1 3.
FT REPEAT 318 371 RCC1 4.
FT VARIANT 8 8 A -> S (in dbSNP:rs4932380).
FT /FTId=VAR_043727.
FT CONFLICT 133 186 RLPLLPCARAYVSPRAPFYRPLAPELRARQLELGAEHALLL
FT DAAGQVFSWGGGR -> GGAAGGLVRLRFLRLRAGAGLRTR
FT APGAQPQSAAGGRRHLPRERELELHRFRDP (in Ref.
FT 3; AAI13827).
SQ SEQUENCE 376 AA; 40079 MW; F72566D12352BBAE CRC64;
MAEERPGAWF GFGFCGFGQE LGSGRGRQVH SPSPLRAGVD ICRVSASWSY TAFVTRGGRL
ELSGSASGAA GRCKDAWASE GLLAVLRAGP GPEALLQVWA AESALRGEPL WAQNVVPEAE
GEDDPAGEAQ AGRLPLLPCA RAYVSPRAPF YRPLAPELRA RQLELGAEHA LLLDAAGQVF
SWGGGRHGQL GHGTLEAELE PRLLEALQGL VMAEVAAGGW HSVCVSETGD IYIWGWNESG
QLALPTRNLA EDGETVAREA TELNEDGSQV KRTGGAEDGA PAPFIAVQPF PALLDLPMGS
DAVKASCGSR HTAVVTRTGE LYTWGWGKYG QLGHEDTTSL DRPRRVEYFV DKQLQVKAVT
CGPWNTYVYA VEKGKS
//
ID RCCD1_HUMAN Reviewed; 376 AA.
AC A6NED2; B2RTP9; Q29RX6;
DT 10-JUN-2008, integrated into UniProtKB/Swiss-Prot.
read moreDT 24-JUL-2007, sequence version 1.
DT 22-JAN-2014, entry version 56.
DE RecName: Full=RCC1 domain-containing protein 1;
GN Name=RCCD1;
OS Homo sapiens (Human).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
OC Catarrhini; Hominidae; Homo.
OX NCBI_TaxID=9606;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=16572171; DOI=10.1038/nature04601;
RA Zody M.C., Garber M., Sharpe T., Young S.K., Rowen L., O'Neill K.,
RA Whittaker C.A., Kamal M., Chang J.L., Cuomo C.A., Dewar K.,
RA FitzGerald M.G., Kodira C.D., Madan A., Qin S., Yang X., Abbasi N.,
RA Abouelleil A., Arachchi H.M., Baradarani L., Birditt B., Bloom S.,
RA Bloom T., Borowsky M.L., Burke J., Butler J., Cook A., DeArellano K.,
RA DeCaprio D., Dorris L. III, Dors M., Eichler E.E., Engels R.,
RA Fahey J., Fleetwood P., Friedman C., Gearin G., Hall J.L., Hensley G.,
RA Johnson E., Jones C., Kamat A., Kaur A., Locke D.P., Madan A.,
RA Munson G., Jaffe D.B., Lui A., Macdonald P., Mauceli E., Naylor J.W.,
RA Nesbitt R., Nicol R., O'Leary S.B., Ratcliffe A., Rounsley S., She X.,
RA Sneddon K.M.B., Stewart S., Sougnez C., Stone S.M., Topham K.,
RA Vincent D., Wang S., Zimmer A.R., Birren B.W., Hood L., Lander E.S.,
RA Nusbaum C.;
RT "Analysis of the DNA sequence and duplication history of human
RT chromosome 15.";
RL Nature 440:671-675(2006).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L.,
RA Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R.,
RA Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V.,
RA Hannenhalli S., Turner R., Yooseph S., Lu F., Nusskern D.R.,
RA Shue B.C., Zheng X.H., Zhong F., Delcher A.L., Huson D.H.,
RA Kravitz S.A., Mouchard L., Reinert K., Remington K.A., Clark A.G.,
RA Waterman M.S., Eichler E.E., Adams M.D., Hunkapiller M.W., Myers E.W.,
RA Venter J.C.;
RL Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases.
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Brain;
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA
RT project: the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
RN [4]
RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RX PubMed=21269460; DOI=10.1186/1752-0509-5-17;
RA Burkard T.R., Planyavsky M., Kaupe I., Breitwieser F.P.,
RA Buerckstuemmer T., Bennett K.L., Superti-Furga G., Colinge J.;
RT "Initial characterization of the human central proteome.";
RL BMC Syst. Biol. 5:17-17(2011).
CC -!- SIMILARITY: Contains 4 RCC1 repeats.
CC -----------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution-NoDerivs License
CC -----------------------------------------------------------------------
DR EMBL; AC068831; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CH471101; EAX02130.1; -; Genomic_DNA.
DR EMBL; BC113826; AAI13827.1; -; mRNA.
DR EMBL; BC140708; AAI40709.1; -; mRNA.
DR EMBL; BC140709; AAI40710.1; -; mRNA.
DR RefSeq; NP_001017919.1; NM_001017919.1.
DR RefSeq; NP_291022.2; NM_033544.2.
DR UniGene; Hs.655895; -.
DR ProteinModelPortal; A6NED2; -.
DR SMR; A6NED2; 119-370.
DR PhosphoSite; A6NED2; -.
DR PaxDb; A6NED2; -.
DR PRIDE; A6NED2; -.
DR Ensembl; ENST00000394258; ENSP00000377801; ENSG00000166965.
DR Ensembl; ENST00000556618; ENSP00000451963; ENSG00000166965.
DR GeneID; 91433; -.
DR KEGG; hsa:91433; -.
DR UCSC; uc002bqj.3; human.
DR CTD; 91433; -.
DR GeneCards; GC15P091498; -.
DR HGNC; HGNC:30457; RCCD1.
DR HPA; HPA039683; -.
DR HPA; HPA040776; -.
DR neXtProt; NX_A6NED2; -.
DR PharmGKB; PA142671092; -.
DR eggNOG; NOG305770; -.
DR HOGENOM; HOG000154085; -.
DR HOVERGEN; HBG061852; -.
DR InParanoid; A6NED2; -.
DR OMA; LPCARAY; -.
DR OrthoDB; EOG7MSMP8; -.
DR PhylomeDB; A6NED2; -.
DR GenomeRNAi; 91433; -.
DR NextBio; 77244; -.
DR PRO; PR:A6NED2; -.
DR ArrayExpress; A6NED2; -.
DR Bgee; A6NED2; -.
DR CleanEx; HS_RCCD1; -.
DR Genevestigator; A6NED2; -.
DR GO; GO:0005737; C:cytoplasm; IDA:HPA.
DR GO; GO:0005886; C:plasma membrane; IDA:HPA.
DR Gene3D; 2.130.10.30; -; 2.
DR InterPro; IPR009091; RCC1/BLIP-II.
DR InterPro; IPR000408; Reg_chr_condens.
DR Pfam; PF00415; RCC1; 2.
DR PRINTS; PR00633; RCCNDNSATION.
DR SUPFAM; SSF50985; SSF50985; 3.
DR PROSITE; PS00625; RCC1_1; FALSE_NEG.
DR PROSITE; PS00626; RCC1_2; 2.
DR PROSITE; PS50012; RCC1_3; 3.
PE 1: Evidence at protein level;
KW Complete proteome; Polymorphism; Reference proteome; Repeat.
FT CHAIN 1 376 RCC1 domain-containing protein 1.
FT /FTId=PRO_0000337973.
FT REPEAT 6 56 RCC1 1.
FT REPEAT 176 227 RCC1 2.
FT REPEAT 229 317 RCC1 3.
FT REPEAT 318 371 RCC1 4.
FT VARIANT 8 8 A -> S (in dbSNP:rs4932380).
FT /FTId=VAR_043727.
FT CONFLICT 133 186 RLPLLPCARAYVSPRAPFYRPLAPELRARQLELGAEHALLL
FT DAAGQVFSWGGGR -> GGAAGGLVRLRFLRLRAGAGLRTR
FT APGAQPQSAAGGRRHLPRERELELHRFRDP (in Ref.
FT 3; AAI13827).
SQ SEQUENCE 376 AA; 40079 MW; F72566D12352BBAE CRC64;
MAEERPGAWF GFGFCGFGQE LGSGRGRQVH SPSPLRAGVD ICRVSASWSY TAFVTRGGRL
ELSGSASGAA GRCKDAWASE GLLAVLRAGP GPEALLQVWA AESALRGEPL WAQNVVPEAE
GEDDPAGEAQ AGRLPLLPCA RAYVSPRAPF YRPLAPELRA RQLELGAEHA LLLDAAGQVF
SWGGGRHGQL GHGTLEAELE PRLLEALQGL VMAEVAAGGW HSVCVSETGD IYIWGWNESG
QLALPTRNLA EDGETVAREA TELNEDGSQV KRTGGAEDGA PAPFIAVQPF PALLDLPMGS
DAVKASCGSR HTAVVTRTGE LYTWGWGKYG QLGHEDTTSL DRPRRVEYFV DKQLQVKAVT
CGPWNTYVYA VEKGKS
//