Full text data of SMIM5
SMIM5
(C17orf109)
[Confidence: medium (present in either hRBCD or BSc_CH or PM22954596)]
Small integral membrane protein 5
Small integral membrane protein 5
UniProt
Q71RC9
ID SMIM5_HUMAN Reviewed; 77 AA.
AC Q71RC9;
DT 28-JUN-2011, integrated into UniProtKB/Swiss-Prot.
read moreDT 28-JUN-2011, sequence version 2.
DT 22-JAN-2014, entry version 48.
DE RecName: Full=Small integral membrane protein 5;
GN Name=SMIM5; Synonyms=C17orf109;
OS Homo sapiens (Human).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
OC Catarrhini; Hominidae; Homo.
OX NCBI_TaxID=9606;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RA Huang Y., Zhou X.M., Zhang P.P., Jiang H.Q., Qin W.X., Zhao X.T.,
RA Wan D.F., Gu J.R.;
RT "Novel human cDNA clones with function of inhibiting cancer cell
RT growth.";
RL Submitted (APR-2001) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=16625196; DOI=10.1038/nature04689;
RA Zody M.C., Garber M., Adams D.J., Sharpe T., Harrow J., Lupski J.R.,
RA Nicholson C., Searle S.M., Wilming L., Young S.K., Abouelleil A.,
RA Allen N.R., Bi W., Bloom T., Borowsky M.L., Bugalter B.E., Butler J.,
RA Chang J.L., Chen C.-K., Cook A., Corum B., Cuomo C.A., de Jong P.J.,
RA DeCaprio D., Dewar K., FitzGerald M., Gilbert J., Gibson R.,
RA Gnerre S., Goldstein S., Grafham D.V., Grocock R., Hafez N.,
RA Hagopian D.S., Hart E., Norman C.H., Humphray S., Jaffe D.B.,
RA Jones M., Kamal M., Khodiyar V.K., LaButti K., Laird G., Lehoczky J.,
RA Liu X., Lokyitsang T., Loveland J., Lui A., Macdonald P., Major J.E.,
RA Matthews L., Mauceli E., McCarroll S.A., Mihalev A.H., Mudge J.,
RA Nguyen C., Nicol R., O'Leary S.B., Osoegawa K., Schwartz D.C.,
RA Shaw-Smith C., Stankiewicz P., Steward C., Swarbreck D.,
RA Venkataraman V., Whittaker C.A., Yang X., Zimmer A.R., Bradley A.,
RA Hubbard T., Birren B.W., Rogers J., Lander E.S., Nusbaum C.;
RT "DNA sequence of human chromosome 17 and analysis of rearrangement in
RT the human lineage.";
RL Nature 440:1045-1049(2006).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L.,
RA Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R.,
RA Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V.,
RA Hannenhalli S., Turner R., Yooseph S., Lu F., Nusskern D.R.,
RA Shue B.C., Zheng X.H., Zhong F., Delcher A.L., Huson D.H.,
RA Kravitz S.A., Mouchard L., Reinert K., Remington K.A., Clark A.G.,
RA Waterman M.S., Eichler E.E., Adams M.D., Hunkapiller M.W., Myers E.W.,
RA Venter J.C.;
RL Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Membrane; Single-pass membrane protein
CC (Potential).
CC -!- SEQUENCE CAUTION:
CC Sequence=AAQ15244.1; Type=Erroneous translation; Note=Wrong choice of CDS;
CC Sequence=EAW89296.1; Type=Erroneous gene model prediction;
CC -----------------------------------------------------------------------
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DR EMBL; AF370408; AAQ15244.1; ALT_SEQ; mRNA.
DR EMBL; AC087749; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CH471099; EAW89296.1; ALT_SEQ; Genomic_DNA.
DR RefSeq; NP_001156467.1; NM_001162995.2.
DR UniGene; Hs.528605; -.
DR PhosphoSite; Q71RC9; -.
DR PRIDE; Q71RC9; -.
DR Ensembl; ENST00000375215; ENSP00000364363; ENSG00000204323.
DR GeneID; 643008; -.
DR KEGG; hsa:643008; -.
DR UCSC; uc002jow.2; human.
DR CTD; 643008; -.
DR GeneCards; GC17P073632; -.
DR HGNC; HGNC:40030; SMIM5.
DR neXtProt; NX_Q71RC9; -.
DR eggNOG; NOG136458; -.
DR HOGENOM; HOG000143677; -.
DR OMA; LIACSCC; -.
DR OrthoDB; EOG7288VS; -.
DR NextBio; 114414; -.
DR Bgee; Q71RC9; -.
DR GO; GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
PE 4: Predicted;
KW Complete proteome; Membrane; Reference proteome; Transmembrane;
KW Transmembrane helix.
FT CHAIN 1 77 Small integral membrane protein 5.
FT /FTId=PRO_0000410867.
FT TRANSMEM 32 52 Helical; (Potential).
SQ SEQUENCE 77 AA; 8540 MW; 7CC220E16930C30A CRC64;
MAATDFVQEM RAVGERLLLK LQRLPQAEPV EIVAFSVIIL FTATVLLLLL IACSCCCTHC
CCPERRGRKV QVQPTPP
//
ID SMIM5_HUMAN Reviewed; 77 AA.
AC Q71RC9;
DT 28-JUN-2011, integrated into UniProtKB/Swiss-Prot.
read moreDT 28-JUN-2011, sequence version 2.
DT 22-JAN-2014, entry version 48.
DE RecName: Full=Small integral membrane protein 5;
GN Name=SMIM5; Synonyms=C17orf109;
OS Homo sapiens (Human).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
OC Catarrhini; Hominidae; Homo.
OX NCBI_TaxID=9606;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RA Huang Y., Zhou X.M., Zhang P.P., Jiang H.Q., Qin W.X., Zhao X.T.,
RA Wan D.F., Gu J.R.;
RT "Novel human cDNA clones with function of inhibiting cancer cell
RT growth.";
RL Submitted (APR-2001) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=16625196; DOI=10.1038/nature04689;
RA Zody M.C., Garber M., Adams D.J., Sharpe T., Harrow J., Lupski J.R.,
RA Nicholson C., Searle S.M., Wilming L., Young S.K., Abouelleil A.,
RA Allen N.R., Bi W., Bloom T., Borowsky M.L., Bugalter B.E., Butler J.,
RA Chang J.L., Chen C.-K., Cook A., Corum B., Cuomo C.A., de Jong P.J.,
RA DeCaprio D., Dewar K., FitzGerald M., Gilbert J., Gibson R.,
RA Gnerre S., Goldstein S., Grafham D.V., Grocock R., Hafez N.,
RA Hagopian D.S., Hart E., Norman C.H., Humphray S., Jaffe D.B.,
RA Jones M., Kamal M., Khodiyar V.K., LaButti K., Laird G., Lehoczky J.,
RA Liu X., Lokyitsang T., Loveland J., Lui A., Macdonald P., Major J.E.,
RA Matthews L., Mauceli E., McCarroll S.A., Mihalev A.H., Mudge J.,
RA Nguyen C., Nicol R., O'Leary S.B., Osoegawa K., Schwartz D.C.,
RA Shaw-Smith C., Stankiewicz P., Steward C., Swarbreck D.,
RA Venkataraman V., Whittaker C.A., Yang X., Zimmer A.R., Bradley A.,
RA Hubbard T., Birren B.W., Rogers J., Lander E.S., Nusbaum C.;
RT "DNA sequence of human chromosome 17 and analysis of rearrangement in
RT the human lineage.";
RL Nature 440:1045-1049(2006).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L.,
RA Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R.,
RA Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V.,
RA Hannenhalli S., Turner R., Yooseph S., Lu F., Nusskern D.R.,
RA Shue B.C., Zheng X.H., Zhong F., Delcher A.L., Huson D.H.,
RA Kravitz S.A., Mouchard L., Reinert K., Remington K.A., Clark A.G.,
RA Waterman M.S., Eichler E.E., Adams M.D., Hunkapiller M.W., Myers E.W.,
RA Venter J.C.;
RL Submitted (JUL-2005) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Membrane; Single-pass membrane protein
CC (Potential).
CC -!- SEQUENCE CAUTION:
CC Sequence=AAQ15244.1; Type=Erroneous translation; Note=Wrong choice of CDS;
CC Sequence=EAW89296.1; Type=Erroneous gene model prediction;
CC -----------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution-NoDerivs License
CC -----------------------------------------------------------------------
DR EMBL; AF370408; AAQ15244.1; ALT_SEQ; mRNA.
DR EMBL; AC087749; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CH471099; EAW89296.1; ALT_SEQ; Genomic_DNA.
DR RefSeq; NP_001156467.1; NM_001162995.2.
DR UniGene; Hs.528605; -.
DR PhosphoSite; Q71RC9; -.
DR PRIDE; Q71RC9; -.
DR Ensembl; ENST00000375215; ENSP00000364363; ENSG00000204323.
DR GeneID; 643008; -.
DR KEGG; hsa:643008; -.
DR UCSC; uc002jow.2; human.
DR CTD; 643008; -.
DR GeneCards; GC17P073632; -.
DR HGNC; HGNC:40030; SMIM5.
DR neXtProt; NX_Q71RC9; -.
DR eggNOG; NOG136458; -.
DR HOGENOM; HOG000143677; -.
DR OMA; LIACSCC; -.
DR OrthoDB; EOG7288VS; -.
DR NextBio; 114414; -.
DR Bgee; Q71RC9; -.
DR GO; GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
PE 4: Predicted;
KW Complete proteome; Membrane; Reference proteome; Transmembrane;
KW Transmembrane helix.
FT CHAIN 1 77 Small integral membrane protein 5.
FT /FTId=PRO_0000410867.
FT TRANSMEM 32 52 Helical; (Potential).
SQ SEQUENCE 77 AA; 8540 MW; 7CC220E16930C30A CRC64;
MAATDFVQEM RAVGERLLLK LQRLPQAEPV EIVAFSVIIL FTATVLLLLL IACSCCCTHC
CCPERRGRKV QVQPTPP
//