Full text data of SPATA33
SPATA33
(C16orf55)
[Confidence: medium (present in either hRBCD or BSc_CH or PM22954596)]
Spermatogenesis-associated protein 33
Note: presumably soluble (membrane word is not in UniProt keywords or features)
Spermatogenesis-associated protein 33
Note: presumably soluble (membrane word is not in UniProt keywords or features)
UniProt
Q96N06
ID SPT33_HUMAN Reviewed; 139 AA.
AC Q96N06; A8WFL2; B4DZN8;
DT 03-APR-2007, integrated into UniProtKB/Swiss-Prot.
read moreDT 01-DEC-2001, sequence version 1.
DT 22-JAN-2014, entry version 65.
DE RecName: Full=Spermatogenesis-associated protein 33;
GN Name=SPATA33; Synonyms=C16orf55;
OS Homo sapiens (Human).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
OC Catarrhini; Hominidae; Homo.
OX NCBI_TaxID=9606;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 2).
RC TISSUE=Teratocarcinoma, and Testis;
RX PubMed=14702039; DOI=10.1038/ng1285;
RA Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R.,
RA Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H.,
RA Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.,
RA Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K.,
RA Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A.,
RA Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M.,
RA Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y.,
RA Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M.,
RA Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K.,
RA Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S.,
RA Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J.,
RA Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y.,
RA Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N.,
RA Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S.,
RA Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S.,
RA Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O.,
RA Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H.,
RA Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B.,
RA Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y.,
RA Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T.,
RA Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y.,
RA Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S.,
RA Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T.,
RA Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M.,
RA Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T.,
RA Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K.,
RA Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R.,
RA Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.;
RT "Complete sequencing and characterization of 21,243 full-length human
RT cDNAs.";
RL Nat. Genet. 36:40-45(2004).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=15616553; DOI=10.1038/nature03187;
RA Martin J., Han C., Gordon L.A., Terry A., Prabhakar S., She X.,
RA Xie G., Hellsten U., Chan Y.M., Altherr M., Couronne O., Aerts A.,
RA Bajorek E., Black S., Blumer H., Branscomb E., Brown N.C., Bruno W.J.,
RA Buckingham J.M., Callen D.F., Campbell C.S., Campbell M.L.,
RA Campbell E.W., Caoile C., Challacombe J.F., Chasteen L.A.,
RA Chertkov O., Chi H.C., Christensen M., Clark L.M., Cohn J.D.,
RA Denys M., Detter J.C., Dickson M., Dimitrijevic-Bussod M., Escobar J.,
RA Fawcett J.J., Flowers D., Fotopulos D., Glavina T., Gomez M.,
RA Gonzales E., Goodstein D., Goodwin L.A., Grady D.L., Grigoriev I.,
RA Groza M., Hammon N., Hawkins T., Haydu L., Hildebrand C.E., Huang W.,
RA Israni S., Jett J., Jewett P.B., Kadner K., Kimball H., Kobayashi A.,
RA Krawczyk M.-C., Leyba T., Longmire J.L., Lopez F., Lou Y., Lowry S.,
RA Ludeman T., Manohar C.F., Mark G.A., McMurray K.L., Meincke L.J.,
RA Morgan J., Moyzis R.K., Mundt M.O., Munk A.C., Nandkeshwar R.D.,
RA Pitluck S., Pollard M., Predki P., Parson-Quintana B., Ramirez L.,
RA Rash S., Retterer J., Ricke D.O., Robinson D.L., Rodriguez A.,
RA Salamov A., Saunders E.H., Scott D., Shough T., Stallings R.L.,
RA Stalvey M., Sutherland R.D., Tapia R., Tesmer J.G., Thayer N.,
RA Thompson L.S., Tice H., Torney D.C., Tran-Gyamfi M., Tsai M.,
RA Ulanovsky L.E., Ustaszewska A., Vo N., White P.S., Williams A.L.,
RA Wills P.L., Wu J.-R., Wu K., Yang J., DeJong P., Bruce D.,
RA Doggett N.A., Deaven L., Schmutz J., Grimwood J., Richardson P.,
RA Rokhsar D.S., Eichler E.E., Gilna P., Lucas S.M., Myers R.M.,
RA Rubin E.M., Pennacchio L.A.;
RT "The sequence and analysis of duplication-rich human chromosome 16.";
RL Nature 432:988-994(2004).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L.,
RA Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R.,
RA Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V.,
RA Hannenhalli S., Turner R., Yooseph S., Lu F., Nusskern D.R.,
RA Shue B.C., Zheng X.H., Zhong F., Delcher A.L., Huson D.H.,
RA Kravitz S.A., Mouchard L., Reinert K., Remington K.A., Clark A.G.,
RA Waterman M.S., Eichler E.E., Adams M.D., Hunkapiller M.W., Myers E.W.,
RA Venter J.C.;
RL Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA
RT project: the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
CC -!- SUBCELLULAR LOCATION: Cytoplasm, cytosol (By similarity). Nucleus
CC (By similarity).
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=2;
CC Name=1;
CC IsoId=Q96N06-1; Sequence=Displayed;
CC Name=2;
CC IsoId=Q96N06-2; Sequence=VSP_053288;
CC -----------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution-NoDerivs License
CC -----------------------------------------------------------------------
DR EMBL; AK056168; BAB71109.1; -; mRNA.
DR EMBL; AK303024; BAG64150.1; -; mRNA.
DR EMBL; AC010538; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CH471184; EAW66714.1; -; Genomic_DNA.
DR EMBL; BC148299; AAI48300.1; -; mRNA.
DR RefSeq; NP_001258836.1; NM_001271907.1.
DR RefSeq; NP_001258837.1; NM_001271908.1.
DR RefSeq; NP_001258838.1; NM_001271909.1.
DR RefSeq; NP_001258839.1; NM_001271910.1.
DR RefSeq; NP_694570.1; NM_153025.2.
DR UniGene; Hs.655171; -.
DR ProteinModelPortal; Q96N06; -.
DR PhosphoSite; Q96N06; -.
DR DMDM; 74732471; -.
DR PaxDb; Q96N06; -.
DR PRIDE; Q96N06; -.
DR DNASU; 124045; -.
DR Ensembl; ENST00000301031; ENSP00000301031; ENSG00000167523.
DR Ensembl; ENST00000579310; ENSP00000462996; ENSG00000167523.
DR GeneID; 124045; -.
DR KEGG; hsa:124045; -.
DR UCSC; uc010vpk.2; human.
DR CTD; 124045; -.
DR GeneCards; GC16P089733; -.
DR HGNC; HGNC:26463; SPATA33.
DR HPA; HPA045648; -.
DR MIM; 615409; gene.
DR neXtProt; NX_Q96N06; -.
DR PharmGKB; PA142672262; -.
DR eggNOG; NOG39640; -.
DR HOGENOM; HOG000015737; -.
DR HOVERGEN; HBG103862; -.
DR InParanoid; Q96N06; -.
DR OrthoDB; EOG7KH9N8; -.
DR PhylomeDB; Q96N06; -.
DR GenomeRNAi; 124045; -.
DR NextBio; 35476528; -.
DR ArrayExpress; Q96N06; -.
DR Bgee; Q96N06; -.
DR CleanEx; HS_C16orf55; -.
DR Genevestigator; Q96N06; -.
DR GO; GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR InterPro; IPR027930; DUF4609.
DR Pfam; PF15382; DUF4609; 1.
PE 2: Evidence at transcript level;
KW Alternative splicing; Complete proteome; Cytoplasm; Nucleus;
KW Polymorphism; Reference proteome.
FT CHAIN 1 139 Spermatogenesis-associated protein 33.
FT /FTId=PRO_0000282409.
FT VAR_SEQ 1 12 MVTHAAGARTFC -> MGLSKSKEKPRKG (in isoform
FT 2).
FT /FTId=VSP_053288.
FT VARIANT 45 45 S -> L (in dbSNP:rs13329897).
FT /FTId=VAR_050897.
SQ SEQUENCE 139 AA; 15461 MW; 30A94F08B8ED0C57 CRC64;
MVTHAAGART FCEEQKKGST YSVPKSKEKL MEKHSQEARQ ADRESEKPVD SLHPGAGTAK
HPPPAASLEE KPDVKQKSSR KKVVVPQIII TRASNETLVS CSSSGSDQQR TIREPEDWGP
YRRHRNPSTA DAYNSHLKE
//
ID SPT33_HUMAN Reviewed; 139 AA.
AC Q96N06; A8WFL2; B4DZN8;
DT 03-APR-2007, integrated into UniProtKB/Swiss-Prot.
read moreDT 01-DEC-2001, sequence version 1.
DT 22-JAN-2014, entry version 65.
DE RecName: Full=Spermatogenesis-associated protein 33;
GN Name=SPATA33; Synonyms=C16orf55;
OS Homo sapiens (Human).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
OC Catarrhini; Hominidae; Homo.
OX NCBI_TaxID=9606;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORMS 1 AND 2).
RC TISSUE=Teratocarcinoma, and Testis;
RX PubMed=14702039; DOI=10.1038/ng1285;
RA Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R.,
RA Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H.,
RA Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S.,
RA Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K.,
RA Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A.,
RA Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M.,
RA Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y.,
RA Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M.,
RA Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K.,
RA Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S.,
RA Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J.,
RA Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y.,
RA Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N.,
RA Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S.,
RA Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S.,
RA Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O.,
RA Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H.,
RA Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B.,
RA Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y.,
RA Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T.,
RA Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y.,
RA Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S.,
RA Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T.,
RA Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M.,
RA Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T.,
RA Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K.,
RA Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R.,
RA Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.;
RT "Complete sequencing and characterization of 21,243 full-length human
RT cDNAs.";
RL Nat. Genet. 36:40-45(2004).
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=15616553; DOI=10.1038/nature03187;
RA Martin J., Han C., Gordon L.A., Terry A., Prabhakar S., She X.,
RA Xie G., Hellsten U., Chan Y.M., Altherr M., Couronne O., Aerts A.,
RA Bajorek E., Black S., Blumer H., Branscomb E., Brown N.C., Bruno W.J.,
RA Buckingham J.M., Callen D.F., Campbell C.S., Campbell M.L.,
RA Campbell E.W., Caoile C., Challacombe J.F., Chasteen L.A.,
RA Chertkov O., Chi H.C., Christensen M., Clark L.M., Cohn J.D.,
RA Denys M., Detter J.C., Dickson M., Dimitrijevic-Bussod M., Escobar J.,
RA Fawcett J.J., Flowers D., Fotopulos D., Glavina T., Gomez M.,
RA Gonzales E., Goodstein D., Goodwin L.A., Grady D.L., Grigoriev I.,
RA Groza M., Hammon N., Hawkins T., Haydu L., Hildebrand C.E., Huang W.,
RA Israni S., Jett J., Jewett P.B., Kadner K., Kimball H., Kobayashi A.,
RA Krawczyk M.-C., Leyba T., Longmire J.L., Lopez F., Lou Y., Lowry S.,
RA Ludeman T., Manohar C.F., Mark G.A., McMurray K.L., Meincke L.J.,
RA Morgan J., Moyzis R.K., Mundt M.O., Munk A.C., Nandkeshwar R.D.,
RA Pitluck S., Pollard M., Predki P., Parson-Quintana B., Ramirez L.,
RA Rash S., Retterer J., Ricke D.O., Robinson D.L., Rodriguez A.,
RA Salamov A., Saunders E.H., Scott D., Shough T., Stallings R.L.,
RA Stalvey M., Sutherland R.D., Tapia R., Tesmer J.G., Thayer N.,
RA Thompson L.S., Tice H., Torney D.C., Tran-Gyamfi M., Tsai M.,
RA Ulanovsky L.E., Ustaszewska A., Vo N., White P.S., Williams A.L.,
RA Wills P.L., Wu J.-R., Wu K., Yang J., DeJong P., Bruce D.,
RA Doggett N.A., Deaven L., Schmutz J., Grimwood J., Richardson P.,
RA Rokhsar D.S., Eichler E.E., Gilna P., Lucas S.M., Myers R.M.,
RA Rubin E.M., Pennacchio L.A.;
RT "The sequence and analysis of duplication-rich human chromosome 16.";
RL Nature 432:988-994(2004).
RN [3]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L.,
RA Mobarry C.M., Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R.,
RA Flanigan M.J., Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V.,
RA Hannenhalli S., Turner R., Yooseph S., Lu F., Nusskern D.R.,
RA Shue B.C., Zheng X.H., Zhong F., Delcher A.L., Huson D.H.,
RA Kravitz S.A., Mouchard L., Reinert K., Remington K.A., Clark A.G.,
RA Waterman M.S., Eichler E.E., Adams M.D., Hunkapiller M.W., Myers E.W.,
RA Venter J.C.;
RL Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases.
RN [4]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA
RT project: the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
CC -!- SUBCELLULAR LOCATION: Cytoplasm, cytosol (By similarity). Nucleus
CC (By similarity).
CC -!- ALTERNATIVE PRODUCTS:
CC Event=Alternative splicing; Named isoforms=2;
CC Name=1;
CC IsoId=Q96N06-1; Sequence=Displayed;
CC Name=2;
CC IsoId=Q96N06-2; Sequence=VSP_053288;
CC -----------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution-NoDerivs License
CC -----------------------------------------------------------------------
DR EMBL; AK056168; BAB71109.1; -; mRNA.
DR EMBL; AK303024; BAG64150.1; -; mRNA.
DR EMBL; AC010538; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR EMBL; CH471184; EAW66714.1; -; Genomic_DNA.
DR EMBL; BC148299; AAI48300.1; -; mRNA.
DR RefSeq; NP_001258836.1; NM_001271907.1.
DR RefSeq; NP_001258837.1; NM_001271908.1.
DR RefSeq; NP_001258838.1; NM_001271909.1.
DR RefSeq; NP_001258839.1; NM_001271910.1.
DR RefSeq; NP_694570.1; NM_153025.2.
DR UniGene; Hs.655171; -.
DR ProteinModelPortal; Q96N06; -.
DR PhosphoSite; Q96N06; -.
DR DMDM; 74732471; -.
DR PaxDb; Q96N06; -.
DR PRIDE; Q96N06; -.
DR DNASU; 124045; -.
DR Ensembl; ENST00000301031; ENSP00000301031; ENSG00000167523.
DR Ensembl; ENST00000579310; ENSP00000462996; ENSG00000167523.
DR GeneID; 124045; -.
DR KEGG; hsa:124045; -.
DR UCSC; uc010vpk.2; human.
DR CTD; 124045; -.
DR GeneCards; GC16P089733; -.
DR HGNC; HGNC:26463; SPATA33.
DR HPA; HPA045648; -.
DR MIM; 615409; gene.
DR neXtProt; NX_Q96N06; -.
DR PharmGKB; PA142672262; -.
DR eggNOG; NOG39640; -.
DR HOGENOM; HOG000015737; -.
DR HOVERGEN; HBG103862; -.
DR InParanoid; Q96N06; -.
DR OrthoDB; EOG7KH9N8; -.
DR PhylomeDB; Q96N06; -.
DR GenomeRNAi; 124045; -.
DR NextBio; 35476528; -.
DR ArrayExpress; Q96N06; -.
DR Bgee; Q96N06; -.
DR CleanEx; HS_C16orf55; -.
DR Genevestigator; Q96N06; -.
DR GO; GO:0005829; C:cytosol; IEA:UniProtKB-SubCell.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR InterPro; IPR027930; DUF4609.
DR Pfam; PF15382; DUF4609; 1.
PE 2: Evidence at transcript level;
KW Alternative splicing; Complete proteome; Cytoplasm; Nucleus;
KW Polymorphism; Reference proteome.
FT CHAIN 1 139 Spermatogenesis-associated protein 33.
FT /FTId=PRO_0000282409.
FT VAR_SEQ 1 12 MVTHAAGARTFC -> MGLSKSKEKPRKG (in isoform
FT 2).
FT /FTId=VSP_053288.
FT VARIANT 45 45 S -> L (in dbSNP:rs13329897).
FT /FTId=VAR_050897.
SQ SEQUENCE 139 AA; 15461 MW; 30A94F08B8ED0C57 CRC64;
MVTHAAGART FCEEQKKGST YSVPKSKEKL MEKHSQEARQ ADRESEKPVD SLHPGAGTAK
HPPPAASLEE KPDVKQKSSR KKVVVPQIII TRASNETLVS CSSSGSDQQR TIREPEDWGP
YRRHRNPSTA DAYNSHLKE
//
MIM
615409
*RECORD*
*FIELD* NO
615409
*FIELD* TI
*615409 SPERMATOGENESIS-ASSOCIATED PROTEIN 33; SPATA33
;;CHROMOSOME 16 OPEN READING FRAME 55; C16ORF55
read more*FIELD* TX
DESCRIPTION
In mouse, Spata33 is predominantly expressed in juvenile and adult
testicular germ cells and is predicted to be involved in spermatogenesis
(Chen et al., 2013).
CLONING
Chen et al. (2013) cloned 2 splice variants of mouse Spata33, which they
designated Spata33a and Spata33b. Full-length Spata33a encodes a deduced
132-amino acid protein with a predicted C-terminal DUF4609 domain.
Spata33b contains 116 amino acids and differs from Spata33 in its
C-terminal half due to a frameshift. Spata33a is serine-rich and
contains several sites for serine phosphorylation and a single site for
threonine phosphorylation. It also has a putative N-terminal
myristoylation site, and the DUF4609 domain contains a putative
N-glycosylation site. Database analysis revealed orthologs of Spata33 in
mammals only. Human SPATA33 encodes a deduced 140-amino acid protein.
RT-PCR of adult mouse tissues detected very high expression in testis,
with much weaker expression in heart and brain, and none in kidney,
liver, lung, spleen, or ovary. Spata33 expression was first detected in
mouse testis soon after birth, with increased expression during the
first wave of spermatogenesis. Immunohistochemical analysis of juvenile
and adult mouse testis showed Spata33 uniformly distributed in the
nucleus and cytosol in spermatocytes, spermatogonia, and round
spermatids, but not in elongated spermatids.
MAPPING
Hartz (2013) mapped the SPATA33 gene to chromosome 16q24.3 based on
alignment of the SPATA33 sequence (GenBank GENBANK AK056168) with the
genomic sequence (GRCh37).
*FIELD* RF
1. Chen, H.; Yi, M.; Sheng, Y.; Cheng, H.; Zhou, R.: A novel testis-enriched
gene Spata33 is expressed during spermatogenesis. PLoS One 8: e67882,
2013. Note: Electronic Article.
2. Hartz, P. A.: Personal Communication. Baltimore, Md. 9/9/2013.
*FIELD* CD
Patricia A. Hartz: 9/9/2013
*FIELD* ED
mgross: 09/09/2013
*RECORD*
*FIELD* NO
615409
*FIELD* TI
*615409 SPERMATOGENESIS-ASSOCIATED PROTEIN 33; SPATA33
;;CHROMOSOME 16 OPEN READING FRAME 55; C16ORF55
read more*FIELD* TX
DESCRIPTION
In mouse, Spata33 is predominantly expressed in juvenile and adult
testicular germ cells and is predicted to be involved in spermatogenesis
(Chen et al., 2013).
CLONING
Chen et al. (2013) cloned 2 splice variants of mouse Spata33, which they
designated Spata33a and Spata33b. Full-length Spata33a encodes a deduced
132-amino acid protein with a predicted C-terminal DUF4609 domain.
Spata33b contains 116 amino acids and differs from Spata33 in its
C-terminal half due to a frameshift. Spata33a is serine-rich and
contains several sites for serine phosphorylation and a single site for
threonine phosphorylation. It also has a putative N-terminal
myristoylation site, and the DUF4609 domain contains a putative
N-glycosylation site. Database analysis revealed orthologs of Spata33 in
mammals only. Human SPATA33 encodes a deduced 140-amino acid protein.
RT-PCR of adult mouse tissues detected very high expression in testis,
with much weaker expression in heart and brain, and none in kidney,
liver, lung, spleen, or ovary. Spata33 expression was first detected in
mouse testis soon after birth, with increased expression during the
first wave of spermatogenesis. Immunohistochemical analysis of juvenile
and adult mouse testis showed Spata33 uniformly distributed in the
nucleus and cytosol in spermatocytes, spermatogonia, and round
spermatids, but not in elongated spermatids.
MAPPING
Hartz (2013) mapped the SPATA33 gene to chromosome 16q24.3 based on
alignment of the SPATA33 sequence (GenBank GENBANK AK056168) with the
genomic sequence (GRCh37).
*FIELD* RF
1. Chen, H.; Yi, M.; Sheng, Y.; Cheng, H.; Zhou, R.: A novel testis-enriched
gene Spata33 is expressed during spermatogenesis. PLoS One 8: e67882,
2013. Note: Electronic Article.
2. Hartz, P. A.: Personal Communication. Baltimore, Md. 9/9/2013.
*FIELD* CD
Patricia A. Hartz: 9/9/2013
*FIELD* ED
mgross: 09/09/2013