Full text data of TTC9C
TTC9C
[Confidence: low (only semi-automatic identification from reviews)]
Tetratricopeptide repeat protein 9C; TPR repeat protein 9C
Note: presumably soluble (membrane word is not in UniProt keywords or features)
Tetratricopeptide repeat protein 9C; TPR repeat protein 9C
Note: presumably soluble (membrane word is not in UniProt keywords or features)
UniProt
Q8N5M4
ID TTC9C_HUMAN Reviewed; 171 AA.
AC Q8N5M4;
DT 10-JUL-2007, integrated into UniProtKB/Swiss-Prot.
read moreDT 01-OCT-2002, sequence version 1.
DT 22-JAN-2014, entry version 91.
DE RecName: Full=Tetratricopeptide repeat protein 9C;
DE Short=TPR repeat protein 9C;
GN Name=TTC9C;
OS Homo sapiens (Human).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
OC Catarrhini; Hominidae; Homo.
OX NCBI_TaxID=9606;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC TISSUE=Brain;
RA Zan Q., Guo J.H., Yu L.;
RL Submitted (NOV-2001) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=B-cell, and Eye;
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA
RT project: the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
RN [3]
RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RX PubMed=21269460; DOI=10.1186/1752-0509-5-17;
RA Burkard T.R., Planyavsky M., Kaupe I., Breitwieser F.P.,
RA Buerckstuemmer T., Bennett K.L., Superti-Furga G., Colinge J.;
RT "Initial characterization of the human central proteome.";
RL BMC Syst. Biol. 5:17-17(2011).
CC -!- SIMILARITY: Belongs to the TTC9 family.
CC -!- SIMILARITY: Contains 3 TPR repeats.
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DR EMBL; AF451992; AAP97691.1; -; mRNA.
DR EMBL; AF451993; AAP97692.1; -; mRNA.
DR EMBL; BC032123; AAH32123.1; -; mRNA.
DR EMBL; BC053665; AAH53665.1; -; mRNA.
DR RefSeq; NP_776171.1; NM_173810.3.
DR RefSeq; XP_005273987.1; XM_005273930.1.
DR RefSeq; XP_005273988.1; XM_005273931.1.
DR UniGene; Hs.31704; -.
DR ProteinModelPortal; Q8N5M4; -.
DR SMR; Q8N5M4; 2-161.
DR IntAct; Q8N5M4; 4.
DR STRING; 9606.ENSP00000325266; -.
DR PhosphoSite; Q8N5M4; -.
DR DMDM; 74759911; -.
DR PaxDb; Q8N5M4; -.
DR PRIDE; Q8N5M4; -.
DR DNASU; 283237; -.
DR Ensembl; ENST00000316461; ENSP00000325266; ENSG00000162222.
DR Ensembl; ENST00000532583; ENSP00000434340; ENSG00000162222.
DR GeneID; 283237; -.
DR KEGG; hsa:283237; -.
DR UCSC; uc001nuy.3; human.
DR CTD; 283237; -.
DR GeneCards; GC11P062495; -.
DR HGNC; HGNC:28432; TTC9C.
DR neXtProt; NX_Q8N5M4; -.
DR PharmGKB; PA142670685; -.
DR eggNOG; NOG74457; -.
DR HOGENOM; HOG000012996; -.
DR HOVERGEN; HBG062451; -.
DR OMA; SYHQKER; -.
DR ChiTaRS; TTC9C; human.
DR GenomeRNAi; 283237; -.
DR NextBio; 93756; -.
DR PRO; PR:Q8N5M4; -.
DR ArrayExpress; Q8N5M4; -.
DR Bgee; Q8N5M4; -.
DR CleanEx; HS_TTC9C; -.
DR Genevestigator; Q8N5M4; -.
DR Gene3D; 1.25.40.10; -; 1.
DR InterPro; IPR023566; PPIase_FKBP.
DR InterPro; IPR013026; TPR-contain_dom.
DR InterPro; IPR011990; TPR-like_helical.
DR InterPro; IPR013105; TPR_2.
DR InterPro; IPR019734; TPR_repeat.
DR PANTHER; PTHR10516; PTHR10516; 1.
DR Pfam; PF07719; TPR_2; 1.
DR SMART; SM00028; TPR; 3.
DR PROSITE; PS50005; TPR; 2.
DR PROSITE; PS50293; TPR_REGION; 2.
PE 1: Evidence at protein level;
KW Complete proteome; Reference proteome; Repeat; TPR repeat.
FT CHAIN 1 171 Tetratricopeptide repeat protein 9C.
FT /FTId=PRO_0000294465.
FT REPEAT 8 41 TPR 1.
FT REPEAT 72 107 TPR 2.
FT REPEAT 108 141 TPR 3.
SQ SEQUENCE 171 AA; 20013 MW; A583DFC56CD3346E CRC64;
MEKRLQEAQL YKEEGNQRYR EGKYRDAVSR YHRALLQLRG LDPSLPSPLP NLGPQGPALT
PEQENILHTT QTDCYNNLAA CLLQMEPVNY ERVREYSQKV LERQPDNAKA LYRAGVAFFH
LQDYDQARHY LLAAVNRQPK DANVRRYLQL TQSELSSYHR KEKQLYLGMF G
//
ID TTC9C_HUMAN Reviewed; 171 AA.
AC Q8N5M4;
DT 10-JUL-2007, integrated into UniProtKB/Swiss-Prot.
read moreDT 01-OCT-2002, sequence version 1.
DT 22-JAN-2014, entry version 91.
DE RecName: Full=Tetratricopeptide repeat protein 9C;
DE Short=TPR repeat protein 9C;
GN Name=TTC9C;
OS Homo sapiens (Human).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
OC Catarrhini; Hominidae; Homo.
OX NCBI_TaxID=9606;
RN [1]
RP NUCLEOTIDE SEQUENCE [MRNA].
RC TISSUE=Brain;
RA Zan Q., Guo J.H., Yu L.;
RL Submitted (NOV-2001) to the EMBL/GenBank/DDBJ databases.
RN [2]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=B-cell, and Eye;
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA
RT project: the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
RN [3]
RP IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RX PubMed=21269460; DOI=10.1186/1752-0509-5-17;
RA Burkard T.R., Planyavsky M., Kaupe I., Breitwieser F.P.,
RA Buerckstuemmer T., Bennett K.L., Superti-Furga G., Colinge J.;
RT "Initial characterization of the human central proteome.";
RL BMC Syst. Biol. 5:17-17(2011).
CC -!- SIMILARITY: Belongs to the TTC9 family.
CC -!- SIMILARITY: Contains 3 TPR repeats.
CC -----------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution-NoDerivs License
CC -----------------------------------------------------------------------
DR EMBL; AF451992; AAP97691.1; -; mRNA.
DR EMBL; AF451993; AAP97692.1; -; mRNA.
DR EMBL; BC032123; AAH32123.1; -; mRNA.
DR EMBL; BC053665; AAH53665.1; -; mRNA.
DR RefSeq; NP_776171.1; NM_173810.3.
DR RefSeq; XP_005273987.1; XM_005273930.1.
DR RefSeq; XP_005273988.1; XM_005273931.1.
DR UniGene; Hs.31704; -.
DR ProteinModelPortal; Q8N5M4; -.
DR SMR; Q8N5M4; 2-161.
DR IntAct; Q8N5M4; 4.
DR STRING; 9606.ENSP00000325266; -.
DR PhosphoSite; Q8N5M4; -.
DR DMDM; 74759911; -.
DR PaxDb; Q8N5M4; -.
DR PRIDE; Q8N5M4; -.
DR DNASU; 283237; -.
DR Ensembl; ENST00000316461; ENSP00000325266; ENSG00000162222.
DR Ensembl; ENST00000532583; ENSP00000434340; ENSG00000162222.
DR GeneID; 283237; -.
DR KEGG; hsa:283237; -.
DR UCSC; uc001nuy.3; human.
DR CTD; 283237; -.
DR GeneCards; GC11P062495; -.
DR HGNC; HGNC:28432; TTC9C.
DR neXtProt; NX_Q8N5M4; -.
DR PharmGKB; PA142670685; -.
DR eggNOG; NOG74457; -.
DR HOGENOM; HOG000012996; -.
DR HOVERGEN; HBG062451; -.
DR OMA; SYHQKER; -.
DR ChiTaRS; TTC9C; human.
DR GenomeRNAi; 283237; -.
DR NextBio; 93756; -.
DR PRO; PR:Q8N5M4; -.
DR ArrayExpress; Q8N5M4; -.
DR Bgee; Q8N5M4; -.
DR CleanEx; HS_TTC9C; -.
DR Genevestigator; Q8N5M4; -.
DR Gene3D; 1.25.40.10; -; 1.
DR InterPro; IPR023566; PPIase_FKBP.
DR InterPro; IPR013026; TPR-contain_dom.
DR InterPro; IPR011990; TPR-like_helical.
DR InterPro; IPR013105; TPR_2.
DR InterPro; IPR019734; TPR_repeat.
DR PANTHER; PTHR10516; PTHR10516; 1.
DR Pfam; PF07719; TPR_2; 1.
DR SMART; SM00028; TPR; 3.
DR PROSITE; PS50005; TPR; 2.
DR PROSITE; PS50293; TPR_REGION; 2.
PE 1: Evidence at protein level;
KW Complete proteome; Reference proteome; Repeat; TPR repeat.
FT CHAIN 1 171 Tetratricopeptide repeat protein 9C.
FT /FTId=PRO_0000294465.
FT REPEAT 8 41 TPR 1.
FT REPEAT 72 107 TPR 2.
FT REPEAT 108 141 TPR 3.
SQ SEQUENCE 171 AA; 20013 MW; A583DFC56CD3346E CRC64;
MEKRLQEAQL YKEEGNQRYR EGKYRDAVSR YHRALLQLRG LDPSLPSPLP NLGPQGPALT
PEQENILHTT QTDCYNNLAA CLLQMEPVNY ERVREYSQKV LERQPDNAKA LYRAGVAFFH
LQDYDQARHY LLAAVNRQPK DANVRRYLQL TQSELSSYHR KEKQLYLGMF G
//