Full text data of YIPF2
YIPF2
[Confidence: low (only semi-automatic identification from reviews)]
Protein YIPF2 (YIP1 family member 2)
Protein YIPF2 (YIP1 family member 2)
UniProt
Q9BWQ6
ID YIPF2_HUMAN Reviewed; 316 AA.
AC Q9BWQ6;
DT 27-JUN-2006, integrated into UniProtKB/Swiss-Prot.
read moreDT 01-JUN-2001, sequence version 1.
DT 22-JAN-2014, entry version 88.
DE RecName: Full=Protein YIPF2;
DE AltName: Full=YIP1 family member 2;
GN Name=YIPF2;
OS Homo sapiens (Human).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
OC Catarrhini; Hominidae; Homo.
OX NCBI_TaxID=9606;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Renal cell carcinoma, and Rhabdomyosarcoma;
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA
RT project: the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
RN [2]
RP ACETYLATION [LARGE SCALE ANALYSIS] AT ALA-2, MASS SPECTROMETRY, AND
RP CLEAVAGE OF INITIATOR METHIONINE.
RX PubMed=22814378; DOI=10.1073/pnas.1210303109;
RA Van Damme P., Lasa M., Polevoda B., Gazquez C., Elosegui-Artola A.,
RA Kim D.S., De Juan-Pardo E., Demeyer K., Hole K., Larrea E.,
RA Timmerman E., Prieto J., Arnesen T., Sherman F., Gevaert K.,
RA Aldabe R.;
RT "N-terminal acetylome analyses and functional insights of the N-
RT terminal acetyltransferase NatB.";
RL Proc. Natl. Acad. Sci. U.S.A. 109:12449-12454(2012).
CC -!- SUBCELLULAR LOCATION: Membrane; Multi-pass membrane protein
CC (Potential).
CC -!- SIMILARITY: Belongs to the YIP1 family.
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DR EMBL; BC000056; AAH00056.1; -; mRNA.
DR EMBL; BC013014; AAH13014.1; -; mRNA.
DR RefSeq; NP_076934.1; NM_024029.3.
DR RefSeq; XP_005260126.1; XM_005260069.1.
DR RefSeq; XP_005260127.1; XM_005260070.1.
DR UniGene; Hs.720136; -.
DR ProteinModelPortal; Q9BWQ6; -.
DR IntAct; Q9BWQ6; 5.
DR MINT; MINT-3062783; -.
DR STRING; 9606.ENSP00000253031; -.
DR DMDM; 74733454; -.
DR PaxDb; Q9BWQ6; -.
DR PRIDE; Q9BWQ6; -.
DR DNASU; 78992; -.
DR Ensembl; ENST00000253031; ENSP00000253031; ENSG00000130733.
DR Ensembl; ENST00000586748; ENSP00000466055; ENSG00000130733.
DR GeneID; 78992; -.
DR KEGG; hsa:78992; -.
DR UCSC; uc002mqb.3; human.
DR CTD; 78992; -.
DR GeneCards; GC19M011033; -.
DR HGNC; HGNC:28476; YIPF2.
DR HPA; HPA019902; -.
DR neXtProt; NX_Q9BWQ6; -.
DR PharmGKB; PA142670556; -.
DR eggNOG; NOG326970; -.
DR HOGENOM; HOG000231137; -.
DR HOVERGEN; HBG056746; -.
DR InParanoid; Q9BWQ6; -.
DR OMA; ILNWVFV; -.
DR OrthoDB; EOG7BW0JR; -.
DR PhylomeDB; Q9BWQ6; -.
DR ChiTaRS; YIPF2; human.
DR GenomeRNAi; 78992; -.
DR NextBio; 67582; -.
DR PRO; PR:Q9BWQ6; -.
DR ArrayExpress; Q9BWQ6; -.
DR Bgee; Q9BWQ6; -.
DR CleanEx; HS_YIPF2; -.
DR Genevestigator; Q9BWQ6; -.
DR GO; GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
DR GO; GO:0030133; C:transport vesicle; IDA:LIFEdb.
DR InterPro; IPR006977; Yip1.
DR Pfam; PF04893; Yip1; 1.
PE 1: Evidence at protein level;
KW Acetylation; Complete proteome; Membrane; Reference proteome;
KW Transmembrane; Transmembrane helix.
FT INIT_MET 1 1 Removed.
FT CHAIN 2 316 Protein YIPF2.
FT /FTId=PRO_0000241454.
FT TOPO_DOM 2 124 Cytoplasmic (Potential).
FT TRANSMEM 125 145 Helical; (Potential).
FT TOPO_DOM 146 163 Lumenal (Potential).
FT TRANSMEM 164 184 Helical; (Potential).
FT TOPO_DOM 185 196 Cytoplasmic (Potential).
FT TRANSMEM 197 219 Helical; (Potential).
FT TOPO_DOM 220 231 Lumenal (Potential).
FT TRANSMEM 232 252 Helical; (Potential).
FT TOPO_DOM 253 256 Cytoplasmic (Potential).
FT TRANSMEM 257 277 Helical; (Potential).
FT TOPO_DOM 278 316 Lumenal (Potential).
FT MOD_RES 2 2 N-acetylalanine.
SQ SEQUENCE 316 AA; 35151 MW; 274E5F2D07EA1A75 CRC64;
MASADELTFH EFEEATNLLA DTPDAATTSR SDQLTPQGHV AVAVGSGGSY GAEDEVEEES
DKAALLQEQQ QQQQPGFWTF SYYQSFFDVD TSQVLDRIKG SLLPRPGHNF VRHHLRNRPD
LYGPFWICAT LAFVLAVTGN LTLVLAQRRD PSIHYSPQFH KVTVAGISIY CYAWLVPLAL
WGFLRWRKGV QERMGPYTFL ETVCIYGYSL FVFIPMVVLW LIPVPWLQWL FGALALGLSA
AGLVFTLWPV VREDTRLVAT VLLSVVVLLH ALLAMGCKLY FFQSLPPENV APPPQITSLP
SNIALSPTLP QSLAPS
//
ID YIPF2_HUMAN Reviewed; 316 AA.
AC Q9BWQ6;
DT 27-JUN-2006, integrated into UniProtKB/Swiss-Prot.
read moreDT 01-JUN-2001, sequence version 1.
DT 22-JAN-2014, entry version 88.
DE RecName: Full=Protein YIPF2;
DE AltName: Full=YIP1 family member 2;
GN Name=YIPF2;
OS Homo sapiens (Human).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
OC Catarrhini; Hominidae; Homo.
OX NCBI_TaxID=9606;
RN [1]
RP NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA].
RC TISSUE=Renal cell carcinoma, and Rhabdomyosarcoma;
RX PubMed=15489334; DOI=10.1101/gr.2596504;
RG The MGC Project Team;
RT "The status, quality, and expansion of the NIH full-length cDNA
RT project: the Mammalian Gene Collection (MGC).";
RL Genome Res. 14:2121-2127(2004).
RN [2]
RP ACETYLATION [LARGE SCALE ANALYSIS] AT ALA-2, MASS SPECTROMETRY, AND
RP CLEAVAGE OF INITIATOR METHIONINE.
RX PubMed=22814378; DOI=10.1073/pnas.1210303109;
RA Van Damme P., Lasa M., Polevoda B., Gazquez C., Elosegui-Artola A.,
RA Kim D.S., De Juan-Pardo E., Demeyer K., Hole K., Larrea E.,
RA Timmerman E., Prieto J., Arnesen T., Sherman F., Gevaert K.,
RA Aldabe R.;
RT "N-terminal acetylome analyses and functional insights of the N-
RT terminal acetyltransferase NatB.";
RL Proc. Natl. Acad. Sci. U.S.A. 109:12449-12454(2012).
CC -!- SUBCELLULAR LOCATION: Membrane; Multi-pass membrane protein
CC (Potential).
CC -!- SIMILARITY: Belongs to the YIP1 family.
CC -----------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution-NoDerivs License
CC -----------------------------------------------------------------------
DR EMBL; BC000056; AAH00056.1; -; mRNA.
DR EMBL; BC013014; AAH13014.1; -; mRNA.
DR RefSeq; NP_076934.1; NM_024029.3.
DR RefSeq; XP_005260126.1; XM_005260069.1.
DR RefSeq; XP_005260127.1; XM_005260070.1.
DR UniGene; Hs.720136; -.
DR ProteinModelPortal; Q9BWQ6; -.
DR IntAct; Q9BWQ6; 5.
DR MINT; MINT-3062783; -.
DR STRING; 9606.ENSP00000253031; -.
DR DMDM; 74733454; -.
DR PaxDb; Q9BWQ6; -.
DR PRIDE; Q9BWQ6; -.
DR DNASU; 78992; -.
DR Ensembl; ENST00000253031; ENSP00000253031; ENSG00000130733.
DR Ensembl; ENST00000586748; ENSP00000466055; ENSG00000130733.
DR GeneID; 78992; -.
DR KEGG; hsa:78992; -.
DR UCSC; uc002mqb.3; human.
DR CTD; 78992; -.
DR GeneCards; GC19M011033; -.
DR HGNC; HGNC:28476; YIPF2.
DR HPA; HPA019902; -.
DR neXtProt; NX_Q9BWQ6; -.
DR PharmGKB; PA142670556; -.
DR eggNOG; NOG326970; -.
DR HOGENOM; HOG000231137; -.
DR HOVERGEN; HBG056746; -.
DR InParanoid; Q9BWQ6; -.
DR OMA; ILNWVFV; -.
DR OrthoDB; EOG7BW0JR; -.
DR PhylomeDB; Q9BWQ6; -.
DR ChiTaRS; YIPF2; human.
DR GenomeRNAi; 78992; -.
DR NextBio; 67582; -.
DR PRO; PR:Q9BWQ6; -.
DR ArrayExpress; Q9BWQ6; -.
DR Bgee; Q9BWQ6; -.
DR CleanEx; HS_YIPF2; -.
DR Genevestigator; Q9BWQ6; -.
DR GO; GO:0016021; C:integral to membrane; IEA:UniProtKB-KW.
DR GO; GO:0030133; C:transport vesicle; IDA:LIFEdb.
DR InterPro; IPR006977; Yip1.
DR Pfam; PF04893; Yip1; 1.
PE 1: Evidence at protein level;
KW Acetylation; Complete proteome; Membrane; Reference proteome;
KW Transmembrane; Transmembrane helix.
FT INIT_MET 1 1 Removed.
FT CHAIN 2 316 Protein YIPF2.
FT /FTId=PRO_0000241454.
FT TOPO_DOM 2 124 Cytoplasmic (Potential).
FT TRANSMEM 125 145 Helical; (Potential).
FT TOPO_DOM 146 163 Lumenal (Potential).
FT TRANSMEM 164 184 Helical; (Potential).
FT TOPO_DOM 185 196 Cytoplasmic (Potential).
FT TRANSMEM 197 219 Helical; (Potential).
FT TOPO_DOM 220 231 Lumenal (Potential).
FT TRANSMEM 232 252 Helical; (Potential).
FT TOPO_DOM 253 256 Cytoplasmic (Potential).
FT TRANSMEM 257 277 Helical; (Potential).
FT TOPO_DOM 278 316 Lumenal (Potential).
FT MOD_RES 2 2 N-acetylalanine.
SQ SEQUENCE 316 AA; 35151 MW; 274E5F2D07EA1A75 CRC64;
MASADELTFH EFEEATNLLA DTPDAATTSR SDQLTPQGHV AVAVGSGGSY GAEDEVEEES
DKAALLQEQQ QQQQPGFWTF SYYQSFFDVD TSQVLDRIKG SLLPRPGHNF VRHHLRNRPD
LYGPFWICAT LAFVLAVTGN LTLVLAQRRD PSIHYSPQFH KVTVAGISIY CYAWLVPLAL
WGFLRWRKGV QERMGPYTFL ETVCIYGYSL FVFIPMVVLW LIPVPWLQWL FGALALGLSA
AGLVFTLWPV VREDTRLVAT VLLSVVVLLH ALLAMGCKLY FFQSLPPENV APPPQITSLP
SNIALSPTLP QSLAPS
//